Commits · 0.12.0 · metexplore / met4j

Jun 13, 2022
- Finish 0.12.0 · ad1d3804
  lcottret authored 2 years ago
  
  0.12.0
  
  ad1d3804
- Change version · c3751420
  lcottret authored 2 years ago
  
  c3751420
- Changelog · 280089b4
  lcottret authored 2 years ago
  
  280089b4
- add empty citations tag · 1178a69c
  lcottret authored 2 years ago
  
  1178a69c
- Add yaml file · defb3959
  lcottret authored 2 years ago
  
  defb3959
Jun 10, 2022
- reorganise tool_conf.xml · ccd126bf
  lcottret authored 2 years ago
  
  ccd126bf
Jun 09, 2022
- Merge branch 'develop' into toolboxJson · 0c416c9c
  lcottret authored 2 years ago
  
  0c416c9c
- Sort the applications by package · 960d0ebc
  lcottret authored 2 years ago
  
  960d0ebc
Jun 07, 2022
- update changelog · f567d012
  cfrainay authored 2 years ago
  
  f567d012
Jun 02, 2022
- [ToolBox] new option: export subnetwork as table · 950eb35d
  cfrainay authored 2 years ago
  
  950eb35d
- [ToolBox] fix bipartite subgraph, add undirected case · 6357c361
  cfrainay authored 2 years ago
  
  6357c361
Jun 01, 2022
- [ToolBox] export sub-distance matrix from compounds of interest · faf386c1
  cfrainay authored 2 years ago
  
  faf386c1
- Merge branch 'feature/BipSubNetExtraction' into develop · 2471e32b
  cfrainay authored 2 years ago
  
  2471e32b
- [graph] fix gml export, keep int as ids (avoid import fail in igraph) · a0eb3850
  cfrainay authored 2 years ago
  
  a0eb3850
- [mathUils] fix ejml submatrix: keep labels · 2f084927
  cfrainay authored 2 years ago
  
  2f084927
- fix man, cmd option error, consol ouput · a8cf6a2b
  cfrainay authored 2 years ago
  
  a8cf6a2b
- Create Extract subgraph from Bipartite network · 921fdfb7
  cfrainay authored 2 years ago
  
  921fdfb7
- Merge branch 'ParallelShortestPath' into develop · ec133221
  cfrainay authored 2 years ago
  
  ec133221
May 30, 2022
- create undirected case for steiner tree, add option to extractionSubnet app · 0c77c1a8
  cfrainay authored 2 years ago
  
  + add test case
  0c77c1a8
- add test case for undirected kshortest · 10648973
  cfrainay authored 2 years ago
  
  10648973
- [toolbox] add undirected option in subgraph extraction · 6a1e169a
  cfrainay authored 2 years ago
  
  6a1e169a
- add undirected case in kshortestpath · ec41624b
  cfrainay authored 2 years ago
  
  ec41624b
- set as Unidrected as shortest path parameter · 45f245a0
  cfrainay authored 2 years ago
  
  alows to compute all to all in undirected case
  45f245a0
- remove ambiguity from test case + add value check in shortestpathunion · fd2f0969
  cfrainay authored 2 years ago
  
  fd2f0969
- update readme with link to javadoc · e6c806a6
  Clement Frainay authored 2 years ago
  
  e6c806a6
- use ShortestPathsUnion in metric closure graph · ef0db8ce
  cfrainay authored 2 years ago
  
  ef0db8ce
- switch to jgrapht many-to-many implementation · 1287ef2b
  cfrainay authored 2 years ago
  
  1287ef2b
- Finish 0.11 · 1a6d6be0
  lcottret authored 2 years ago
  
  0.11
  
  1a6d6be0
- Finish 0.11 · 0cc9f603
  lcottret authored 2 years ago
  
  0cc9f603
- Merge branch 'develop' into release/0.11 · f3239819
  lcottret authored 2 years ago
  
  f3239819
May 25, 2022
- [toolbox] fix error for tiny networks · d7a2c87b
  cfrainay authored 2 years ago
  
  handle case expected top centrality nodes greater than network order
  d7a2c87b
- [Toolbox] empty file handling in NetworkAnalysis · d326310a
  cfrainay authored 2 years ago
  
  d326310a
May 24, 2022
- fix missing optional files exceptions in metaborank, precursor and scope network · 90a25607
  cfrainay authored 2 years ago
  
  90a25607
May 23, 2022
- ChangeLog · 7adfff6c
  lcottret authored 2 years ago
  
  7adfff6c
- Change version number · 1d8e7189
  lcottret authored 2 years ago
  
  1d8e7189
- Merge branch 'toolboxJsonDesc' into 'develop' · 2abf493a
  Ludovic Cottret authored 2 years ago
  
  [toolbox] Galaxy wrappers and json description See merge request !11
  2abf493a
- [toolbox] Galaxy wrappers and json description · 5a829478
  Ludovic Cottret authored 2 years ago
  
  5a829478
May 12, 2022
- parallelised shortest path · c25f2658
  cfrainay authored 2 years ago
  
  getAllShortest return list for consistency with other class methods + improve code reuse.
  c25f2658
- Finish tag 0.10 · 781cbe56
  lcottret authored 2 years ago
  
  0.10
  
  781cbe56
- Finish tag 0.10 · b3df96bd
  lcottret authored 2 years ago
  
  b3df96bd