From Dev
Showing
- README.md 28 additions, 22 deletionsREADME.md
- Snakefile 30 additions, 27 deletionsSnakefile
- config/example.yaml 2 additions, 5 deletionsconfig/example.yaml
- containers/te_finder_2.31.sif 0 additions, 0 deletionscontainers/te_finder_2.31.sif
- envs/bedtools.yaml 6 additions, 0 deletionsenvs/bedtools.yaml
- envs/biopython.yaml 7 additions, 0 deletionsenvs/biopython.yaml
- envs/minimap2.yaml 8 additions, 0 deletionsenvs/minimap2.yaml
- envs/networkX.yaml 3 additions, 3 deletionsenvs/networkX.yaml
- envs/snakemake_env.yaml 0 additions, 14 deletionsenvs/snakemake_env.yaml
- executables/matcherThreads2.32 0 additions, 0 deletionsexecutables/matcherThreads2.32
- run_Snakemake.sh 1 addition, 1 deletionrun_Snakemake.sh
- scripts/bestHits.py 1 addition, 2 deletionsscripts/bestHits.py
- scripts/cliques.py 6 additions, 7 deletionsscripts/cliques.py
- scripts/reformat.py 3 additions, 2 deletionsscripts/reformat.py
- scripts/seqIdLenFasta.py 0 additions, 1 deletionscripts/seqIdLenFasta.py
- scripts/stats.py 19 additions, 68 deletionsscripts/stats.py
- scripts/uniqueCopies.py 0 additions, 6 deletionsscripts/uniqueCopies.py
Loading
Please register or sign in to comment